Welcome to the 2021 Crops in Silico Hackathon!

These materials walk through some of the basics to using yggdrasil to connect models using Jupyter notebooks. These exercises were created for the 2021 Crops in Silico hackathon, but can be used by anyone who would like to learn how to use yggdrasil. The 2021 Crops in Silico hackathon was recorded and can be viewed here.

Contents:

• Setup
  • MyBinder
  • Local Install
  • Docker Container
• Debugging
• Introduction to Yggdrasil
  • What
  • Why
  • How
  • Who
• Introduction to Jupyter Notebooks
  • Some notes about notebooks
• Command Line Interfaces (CLIs)
  • Running Integrations
  • Validating Integration YAML(s)
  • Checking the Installation
  • Configuring the Installation
  • General CLI
• Integration Tips