transforms

This example is used by yggdrasil to test the support transformations in each of the supported languages and should not be used outside of the tests.

R Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

C Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

C++ Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

Dummy Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

Fortran Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

Julia Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

Matlab Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

OpenSimRoot Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

Python Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

PyTorch Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

SBML Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}

Timesync Version

Model Code:

1from yggdrasil.tools import pprint_encoded
2from yggdrasil.examples.transforms import get_test_data
3
4
5def src():
6    test_data = get_test_data()
7    print('SENDING')
8    pprint_encoded(test_data)
9    return test_data

1import os
2from yggdrasil.examples.transforms import check_received_data
3
4
5def dst(received_data):
6    transform = os.environ['TEST_TRANSFORM']
7    check_received_data(transform, received_data)
8    print('CONFIRMED')
9    return

Model YAML:

 1models:
 2  - name: source
 3    language: python
 4    args: ./src/src.py
 5    function: src
 6
 7  - name: {{TEST_LANGUAGE}}_model
 8    language: {{TEST_LANGUAGE}}
 9    args: ./src/model{{TEST_LANGUAGE_EXT}}
10    function: model
11    {{{TEST_MODEL_IO}}}
12
13  - name: destination
14    language: python
15    args: ./src/dst.py
16    function: dst
17
18connections:
19  - input: source:output
20    output:
21      name: {{TEST_LANGUAGE}}_model:input
22      transform: {{TEST_TRANSFORM}}
23  - input:
24      name: {{TEST_LANGUAGE}}_model:output
25      transform: {{TEST_TRANSFORM}}
26    output:
27      name: destination:input
28      transform: {{TEST_TRANSFORM}}